BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007G03SP1|AL425750
(759 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1274 1489 0.0
>3x_Contig1274
Length = 5941
Score = 1489 bits (751), Expect = 0.0
Identities = 757/759 (99%)
Strand = Plus / Minus
Query: 1 aagaaacagaaggcgcgtaagatgaagcgtatcacactactaagaatacagaccaccaag 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 5078 aagaaacagaaggcgcgttagatgaagcgtatcacactactaagaatacagaccaccaag 5019
Query: 61 attatgttgaaggcgtgataagccgtgttggaagagactttttgagttaccgtagcagta 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5018 attatgttgaaggcgtgataagccgtgttggaagagactttttgagttaccgtagcagtt 4959
Query: 121 atgctccaagtaaaaacattatagacggtgaaacgttagaacaattgacaacgtatttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4958 atgctccaagtaaaaacattatagacggtgaaacgttagaacaattgacaacgtatttac 4899
Query: 181 caagcgatcaaagatggatagccagtaagatgaagcatgccgattccggcaaactagaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4898 caagcgatcaaagatggatagccagtaagatgaagcatgccgattccggcaaactagaca 4839
Query: 241 ttttcaataaatatataaacgagatgcgtactaactacgtataagcagcagtggacatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4838 ttttcaataaatatataaacgagatgcgtactaactacgtataagcagcagtggacatat 4779
Query: 301 gacctctgtagaaatcctgtaatattatatctttgtccaaatgtcggaacacgaattcta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4778 gacctctgtagaaatcctgtaatattatatctttgtccaaatgtcggaacacgaattcta 4719
Query: 361 aattctggggtaacagtttacttagccataacccgtctatcttacctgtttcgttatcgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4718 aattctggggtaacagtttacttagccataacccgtctatcttacctgtttcgttatcgt 4659
Query: 421 tgtgaattttaagtccgttgaattggtaatagatcaagttccctgcgaacttgtggccac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4658 tgtgaattttaagtccgttgaattggtaatagatcaagttccctgcgaacttgtggccac 4599
Query: 481 cgaaatgcgaaacgatcccagttttcaagtttggtttgattgagttaagctttgctatga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4598 cgaaatgcgaaacgatcccagttttcaagtttggtttgattgagttaagctttgctatga 4539
Query: 541 gtaaaggtgctaattcaccgcatcttgcatcacgcaggtaatgtccgcataccattgcta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4538 gtaaaggtgctaattcaccgcatcttgcatcacgcaggtaatgtccgcataccattgcta 4479
Query: 601 tgtcagaatggaacggttcgctctgaaagtttggtatactattagctacgctaccgctcg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4478 tgtcagaatggaacggttcgctctgaaagtttggtatactattagctacgctaccgctcg 4419
Query: 661 agtgtattgcagtttgtccaacggcatctgaccccttcaaaaagtcattgaacgagagtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4418 agtgtattgcagtttgtccaacggcatctgaccccttcaaaaagtcattgaacgagagtt 4359
Query: 721 tcttccgggagtcctgtttcccatcacctaagaagaggg 759
|||||||||||||||||||||||||||||||||||||||
Sbjct: 4358 tcttccgggagtcctgtttcccatcacctaagaagaggg 4320
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4685
Number of Sequences: 1807
Number of extensions: 4685
Number of successful extensions: 20
Number of sequences better than 1.0e-20: 1
length of query: 759
length of database: 10,358,551
effective HSP length: 16
effective length of query: 743
effective length of database: 10,329,639
effective search space: 7674921777
effective search space used: 7674921777
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)